Pseudomonas putida GB-1, PputGB1_1523

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_1523
Name
Replicon chromosome
Genomic location 1709904 - 1713041 (+ strand)

Cross-References

RefSeq YP_001667764.1
GI 167032533
Entrez 5869299
INSDC ABY97428.1
NCBI Locus Tag PputGB1_1523
UniParc UPI0000F25A1D
UniProtKB Acc B0KF88
UniProtKB ID B0KF88_PSEPG
UniRef100 UniRef100_B0KF88
UniRef50 UniRef50_B0KF88
UniRef90 UniRef90_B0KF88

Product

Feature Type CDS
Coding Frame 1
Product Name
TonB-dependent receptor
Synonyms
Evidence for Translation
Charge (pH 7) -19.58
Kyte-Doolittle Hydrophobicity Value -0.503
Molecular Weight (kDa) 115518.3
Isoelectric Point (pI) 5.28

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 53 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004521 (333 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_1523

Human Homologs

References

No references are associated with this feature.