Pseudomonas putida GB-1, PputGB1_1589

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_1589
Name
Replicon chromosome
Genomic location 1791817 - 1792752 (+ strand)

Cross-References

RefSeq YP_001667830.1
GI 167032599
Entrez 5869369
INSDC ABY97494.1
NCBI Locus Tag PputGB1_1589
UniParc UPI0000F25A01
UniProtKB Acc B0KG73
UniProtKB ID B0KG73_PSEPG
UniRef100 UniRef100_B0KG73
UniRef50 UniRef50_I7BP99
UniRef90 UniRef90_I7BP99

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA-binding transcriptional regulator LysR
Synonyms
Evidence for Translation
Charge (pH 7) 0.02
Kyte-Doolittle Hydrophobicity Value 0.052
Molecular Weight (kDa) 34275.2
Isoelectric Point (pI) 7.01

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 502 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG017188 (40 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_1589

Human Homologs

References

No references are associated with this feature.