Pseudomonas putida GB-1, PputGB1_1839
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida GB-1
GCF_000019125.1|latest |
| Locus Tag |
PputGB1_1839
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 2069358 - 2071004 (+ strand) |
Cross-References
| RefSeq | YP_001668078.1 |
| GI | 167032847 |
| Entrez | 5869619 |
| NCBI Locus Tag | PputGB1_1839 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
AMP-dependent synthetase and ligase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -9.44 |
| Kyte-Doolittle Hydrophobicity Value | -0.109 |
| Molecular Weight (kDa) | 59526.0 |
| Isoelectric Point (pI) | 6.17 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 593 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003016 (484 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PputGB1_1839
Search term: AMP-dependent synthetase and ligase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
acyl-CoA synthetase medium chain family member 5 [Source:HGNC Symbol;Acc:HGNC:26060]
E-value:
9.3e-76
Percent Identity:
35.9
|
References
No references are associated with this feature.