Pseudomonas putida GB-1, PputGB1_2354

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_2354
Name
Replicon chromosome
Genomic location 2633345 - 2634250 (+ strand)

Cross-References

RefSeq YP_001668590.1
GI 167033359
Entrez 5870143
INSDC ABY98254.1
NCBI Locus Tag PputGB1_2354
UniParc UPI0000F25C40
UniProtKB Acc B0KPQ4
UniProtKB ID B0KPQ4_PSEPG
UniRef100 UniRef100_B0KPQ4
UniRef50 UniRef50_Q88GZ8
UniRef90 UniRef90_Q88GZ8

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 0.06
Kyte-Doolittle Hydrophobicity Value -0.164
Molecular Weight (kDa) 33211.4
Isoelectric Point (pI) 7.02

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 433 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG016375 (71 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_2354

Human Homologs

References

No references are associated with this feature.