Pseudomonas putida GB-1, PputGB1_2385

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_2385
Name
Replicon chromosome
Genomic location 2669711 - 2670109 (- strand)

Cross-References

RefSeq YP_001668620.1
GI 167033389
Entrez 5870174
INSDC ABY98284.1
NCBI Locus Tag PputGB1_2385
UniParc UPI000000F70A
UniProtKB Acc B0KPT4
UniProtKB ID B0KPT4_PSEPG
UniRef100 UniRef100_I7B3L2
UniRef50 UniRef50_Q4K9Q0
UniRef90 UniRef90_Q1I9C2

Product

Feature Type CDS
Coding Frame 1
Product Name
MerR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 0.17
Kyte-Doolittle Hydrophobicity Value -0.620
Molecular Weight (kDa) 15.3
Isoelectric Point (pI) 7.27

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 275 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003423 (524 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_2385

Human Homologs

References

No references are associated with this feature.