Pseudomonas putida GB-1, PputGB1_2525

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_2525
Name
Replicon chromosome
Genomic location 2836967 - 2837986 (+ strand)

Cross-References

RefSeq YP_001668760.1
GI 167033529
Entrez 5870314
INSDC ABY98424.1
NCBI Locus Tag PputGB1_2525
UniParc UPI0000F25EE9
UniProtKB Acc B0KRR0
UniProtKB ID B0KRR0_PSEPG
UniRef100 UniRef100_B0KRR0
UniRef50 UniRef50_Q4K7W8
UniRef90 UniRef90_T2H6W8

Product

Feature Type CDS
Coding Frame 1
Product Name
LacI family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 0.33
Kyte-Doolittle Hydrophobicity Value 0.106
Molecular Weight (kDa) 36111.1
Isoelectric Point (pI) 7.12

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 375 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003187 (512 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_2525

Human Homologs

References

No references are associated with this feature.