Pseudomonas putida GB-1, PputGB1_2640

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_2640
Name
Replicon chromosome
Genomic location 2957003 - 2957824 (- strand)

Cross-References

RefSeq YP_001668875.1
GI 167033644
Entrez 5870429
INSDC ABY98539.1
NCBI Locus Tag PputGB1_2640
UniParc UPI0000F25D47
UniProtKB Acc B0KSL4
UniProtKB ID B0KSL4_PSEPG
UniRef100 UniRef100_B0KSL4
UniRef50 UniRef50_Q88HU8
UniRef90 UniRef90_Q88HU8

Product

Feature Type CDS
Coding Frame 1
Product Name
Ku protein
Synonyms
Evidence for Translation
Charge (pH 7) 2.46
Kyte-Doolittle Hydrophobicity Value -0.414
Molecular Weight (kDa) 30861.3
Isoelectric Point (pI) 8.73

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 170 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003323 (492 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_2640
Search term: Ku protein

Human Homologs

References

No references are associated with this feature.