Pseudomonas putida GB-1, PputGB1_2793

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_2793
Name
Replicon chromosome
Genomic location 3139914 - 3140684 (+ strand)

Cross-References

RefSeq YP_001669023.1
GI 167033792
Entrez 5870579
INSDC ABY98687.1
NCBI Locus Tag PputGB1_2793
UniParc UPI0000F25BF3
UniProtKB Acc B0KU24
UniProtKB ID B0KU24_PSEPG
UniRef100 UniRef100_B0KU24
UniRef50 UniRef50_Q9X6U2
UniRef90 UniRef90_Q9AE70

Product

Feature Type CDS
Coding Frame 1
Product Name
3-hydroxybutyrate dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -0.94
Kyte-Doolittle Hydrophobicity Value 0.238
Molecular Weight (kDa) 26618.3
Isoelectric Point (pI) 6.79

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
2Q2W OXIDOREDUCTASE 05/29/07 Structure of D-3-Hydroxybutyrate Dehydrogenase from Pseudomonas putida Pseudomonas putida 2.12 X-RAY DIFFRACTION 96.1
2Q2V OXIDOREDUCTASE 05/29/07 Structure of D-3-Hydroxybutyrate Dehydrogenase from Pseudomonas putida Pseudomonas putida 1.9 X-RAY DIFFRACTION 96.1
2Q2Q OXIDOREDUCTASE 05/29/07 Structure of D-3-Hydroxybutyrate Dehydrogenase from Pseudomonas putida Pseudomonas putida 2.02 X-RAY DIFFRACTION 96.1

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 651 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000180 (2633 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_2793

Human Homologs

Ensembl 110, assembly GRCh38.p14
carbonyl reductase 1 [Source:HGNC Symbol;Acc:HGNC:1548]
E-value: 5.1e-08
Percent Identity: 31.9

References

No references are associated with this feature.