Pseudomonas putida GB-1, PputGB1_2956

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_2956
Name
Replicon chromosome
Genomic location 3310113 - 3311027 (+ strand)

Cross-References

RefSeq YP_001669184.1
GI 167033953
Entrez 5870741
INSDC ABY98848.1
NCBI Locus Tag PputGB1_2956
UniParc UPI0000F25DC5
UniProtKB Acc B0KFC5
UniProtKB ID B0KFC5_PSEPG
UniRef100 UniRef100_B0KFC5
UniRef50 UniRef50_Q9I0Z0
UniRef90 UniRef90_Q48JB6

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -0.82
Kyte-Doolittle Hydrophobicity Value 0.048
Molecular Weight (kDa) 33353.9
Isoelectric Point (pI) 6.69

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 285 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001179 (1943 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_2956

Human Homologs

References

No references are associated with this feature.