Pseudomonas putida GB-1, PputGB1_3124

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_3124
Name
Replicon chromosome
Genomic location 3498907 - 3500694 (- strand)

Cross-References

RefSeq YP_001669352.1
GI 167034121
Entrez 5870909
INSDC ABY99016.1
NCBI Locus Tag PputGB1_3124
UniParc UPI0000F25C8C
UniProtKB Acc B0KGL5
UniProtKB ID B0KGL5_PSEPG
UniRef100 UniRef100_B0KGL5
UniRef50 UniRef50_Q4KEK5
UniRef90 UniRef90_Q4KEK5

Product

Feature Type CDS
Coding Frame 1
Product Name
methanol/ethanol family PQQ-dependent dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) 4.63
Kyte-Doolittle Hydrophobicity Value -0.300
Molecular Weight (kDa) 64842.2
Isoelectric Point (pI) 8.73

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
6ZCW OXIDOREDUCTASE 06/12/20 Crystal structure of lanthanide-dependent alcohol dehydrogenase PedH from Pseudomonas putida KT2440 Pseudomonas putida KT2440 1.65 X-RAY DIFFRACTION 98.9
6ZCV OXIDOREDUCTASE 06/12/20 Crystal structure of lanthanide-dependent alcohol dehydrogenase PedH from Pseudomonas putida KT2440 Pseudomonas putida KT2440 1.7 X-RAY DIFFRACTION 98.8

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 181 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015849 (98 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_3124

Human Homologs

References

No references are associated with this feature.