Pseudomonas putida GB-1, PputGB1_3304

Gene Feature Overview

Strain	Pseudomonas putida GB-1 GCF_000019125.1|latest
Locus Tag	PputGB1_3304
Name
Replicon	chromosome
Genomic location	3708924 - 3709622 (+ strand)

Cross-References

RefSeq	YP_001669532.1
GI	167034301
Entrez	5871089
INSDC	ABY99196.1
NCBI Locus Tag	PputGB1_3304
UniParc	UPI0000F25BD8
UniProtKB Acc	B0KIP1
UniProtKB ID	B0KIP1_PSEPG
UniRef100	UniRef100_B0KIP1
UniRef50	UniRef50_Q9I4C8
UniRef90	UniRef90_Q88JT3

Product

Feature Type	CDS
Coding Frame	1
Product Name	pirin domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7)	-8.59
Kyte-Doolittle Hydrophobicity Value	-0.379
Molecular Weight (kDa)	25680.5
Isoelectric Point (pI)	5.33

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 401 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001167 (530 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PputGB1_3304 Search term: pirin domain-containing protein

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000369785 pirin [Source:HGNC Symbol;Acc:HGNC:30048] E-value: 1.3e-10 Percent Identity: 35.9
Ensembl 110, assembly GRCh38.p14	ENSP00000369786 pirin [Source:HGNC Symbol;Acc:HGNC:30048] E-value: 1.3e-10 Percent Identity: 35.9

References