Pseudomonas putida GB-1, PputGB1_3480 (infC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_3480
Name
infC
Replicon chromosome
Genomic location 3886210 - 3886761 (- strand)

Cross-References

RefSeq YP_001669707.1
GI 167034476
Entrez 5871267
INSDC ABY99371.1
NCBI Locus Tag PputGB1_3480
UniParc UPI00001E0541
UniProtKB Acc B0KKR7
UniProtKB ID IF3_PSEPG
UniRef100 UniRef100_A5W5E0
UniRef50 UniRef50_Q4KEW3
UniRef90 UniRef90_Q1IC14

Product

Feature Type CDS
Coding Frame 1
Product Name
translation initiation factor IF-3
Synonyms
Evidence for Translation
Charge (pH 7) 7.69
Kyte-Doolittle Hydrophobicity Value -0.663
Molecular Weight (kDa) 20879.2
Isoelectric Point (pI) 10.06

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
6VRJ TRANSLATION 02/07/20 Solution structure of Pseudomonas aeruginosa IF3 C-terminal domain Pseudomonas aeruginosa NOT SOLUTION NMR 91.7

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 582 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002828 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_3480
Search term: infC

Human Homologs

References

No references are associated with this feature.