Pseudomonas putida GB-1, PputGB1_3888

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_3888
Name
Replicon chromosome
Genomic location 4334285 - 4335481 (- strand)

Cross-References

RefSeq YP_001670114.1
GI 167034883
Entrez 5871682
INSDC ABY99778.1
NCBI Locus Tag PputGB1_3888
UniParc UPI000164C140
UniProtKB Acc B0KQ23
UniProtKB ID B0KQ23_PSEPG
UniRef100 UniRef100_B0KQ23
UniRef50 UniRef50_Q9I3M9
UniRef90 UniRef90_B0KQ23

Product

Feature Type CDS
Coding Frame 1
Product Name
cytochrome c-type biogenesis protein CcmI
Synonyms
Evidence for Translation
Charge (pH 7) -9.25
Kyte-Doolittle Hydrophobicity Value -0.128
Molecular Weight (kDa) 43136.8
Isoelectric Point (pI) 4.84

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 126 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001398 (530 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_3888

Human Homologs

References

No references are associated with this feature.