Pseudomonas putida GB-1, PputGB1_4219 (rimO)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_4219
Name
rimO
Replicon chromosome
Genomic location 4719383 - 4720714 (+ strand)

Cross-References

RefSeq YP_001670443.1
GI 167035212
EC Number 1.3.1.74
Entrez 5872023
INSDC ABZ00108.1
NCBI Locus Tag PputGB1_4219
UniParc UPI0000F2505C
UniProtKB Acc B0KTL0
UniProtKB ID RIMO_PSEPG
UniRef100 UniRef100_B0KTL0
UniRef50 UniRef50_A8AIT5
UniRef90 UniRef90_A5VZS9

Product

Feature Type CDS
Coding Frame 1
Product Name
30S ribosomal protein S12 methylthiotransferase
Synonyms
Evidence for Translation
Charge (pH 7) -20.11
Kyte-Doolittle Hydrophobicity Value -0.195
Molecular Weight (kDa) 49464.1
Isoelectric Point (pI) 4.64

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 640 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000882 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_4219
Search term: rimO

Human Homologs

References

No references are associated with this feature.