Pseudomonas putida GB-1, PputGB1_4564
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida GB-1
GCF_000019125.1|latest |
| Locus Tag |
PputGB1_4564
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 5100698 - 5102248 (+ strand) |
Cross-References
| RefSeq | YP_001670786.1 |
| GI | 167035555 |
| Entrez | 5872372 |
| NCBI Locus Tag | PputGB1_4564 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
Sel1 domain-containing protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -3.45 |
| Kyte-Doolittle Hydrophobicity Value | -0.480 |
| Molecular Weight (kDa) | 55871.1 |
| Isoelectric Point (pI) | 6.21 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 7ULA | TRANSFERASE | 04/04/22 | Structure of the Pseudomonas putida AlgKX modification and secretion complex | Pseudomonas putida | 2.46 | X-RAY DIFFRACTION | 90.2 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 41 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG002123 (490 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PputGB1_4564
Search term: Sel1 domain-containing protein
|
Human Homologs
References
No references are associated with this feature.