Pseudomonas putida GB-1, PputGB1_5151
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida GB-1
GCF_000019125.1|latest |
| Locus Tag |
PputGB1_5151
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 5763574 - 5764749 (+ strand) |
Cross-References
| RefSeq | YP_001671371.1 |
| GI | 167036140 |
| EC Number | 1.3.99.22 |
| Entrez | 5872966 |
| NCBI Locus Tag | PputGB1_5151 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
coproporphyrinogen III oxidase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -10.15 |
| Kyte-Doolittle Hydrophobicity Value | -0.233 |
| Molecular Weight (kDa) | 43548.0 |
| Isoelectric Point (pI) | 5.03 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 583 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000377 (534 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PputGB1_5151
Search term: coproporphyrinogen III oxidase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
radical S-adenosyl methionine domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25634]
E-value:
6.9e-49
Percent Identity:
33.4
|
References
No references are associated with this feature.