Pseudomonas putida S16, PPS_0006

Gene Feature Overview

Strain	Pseudomonas putida S16 GCF_000219705.1|latest
Locus Tag	PPS_0006
Name
Replicon	chromosome
Genomic location	6408 - 8090 (- strand)

Cross-References

RefSeq	YP_004699475.1
GI	339484947
Entrez	10935678
INSDC	AEJ10595.1
NCBI Locus Tag	PPS_0006
UniParc	UPI00021722F3
UniProtKB Acc	F8FSZ7
UniProtKB ID	F8FSZ7_PSEP6
UniRef100	UniRef100_A0A099N911
UniRef50	UniRef50_P0A140
UniRef90	UniRef90_P0A140

Product

Feature Type	CDS
Coding Frame	1
Product Name	putative inner membrane protein translocase component YidC
Synonyms
Evidence for Translation
Charge (pH 7)	5.90
Kyte-Doolittle Hydrophobicity Value	0.014
Molecular Weight (kDa)	61.9
Isoelectric Point (pI)	9.11

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 585 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG005099 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PPS_0006 Search term: putative inner membrane protein translocase component YidC

Human Homologs

References