Pseudomonas putida S16, PPS_0078

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_0078
Name
Replicon chromosome
Genomic location 77148 - 78155 (- strand)

Cross-References

RefSeq YP_004699547.1
GI 339485019
Entrez 10935750
INSDC AEJ10667.1
NCBI Locus Tag PPS_0078
UniParc UPI00021723B6
UniProtKB Acc F8FUB7
UniProtKB ID F8FUB7_PSEP6
UniRef100 UniRef100_A0A099N6Z9
UniRef50 UniRef50_Q5H503
UniRef90 UniRef90_Q88RL5

Product

Feature Type CDS
Coding Frame 1
Product Name
DL-methionine transporter, ATP-binding subunit
Synonyms
Evidence for Translation
Charge (pH 7) -3.88
Kyte-Doolittle Hydrophobicity Value -0.101
Molecular Weight (kDa) 36.8
Isoelectric Point (pI) 6.25

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005042 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_0078

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 1.7e-32
Percent Identity: 40.9
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 1.7e-32
Percent Identity: 40.9
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 1.7e-32
Percent Identity: 40.9
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 1.7e-32
Percent Identity: 40.9

References

No references are associated with this feature.