Pseudomonas putida S16, PPS_0090

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_0090
Name
Replicon chromosome
Genomic location 91284 - 91412 (+ strand)

Cross-References

RefSeq YP_004699559.1
GI 339485031
Entrez 10935762
INSDC AEJ10679.1
NCBI Locus Tag PPS_0090
UniParc UPI00021723C2
UniProtKB Acc F8FUC9
UniProtKB ID F8FUC9_PSEP6
UniRef100 UniRef100_A0A099N9B3
UniRef50 UniRef50_Q3KKA8
UniRef90 UniRef90_B1JFJ2

Product

Feature Type CDS
Coding Frame 1
Product Name
cytochrome c-type protein subunit
Synonyms
Evidence for Translation
Charge (pH 7) -0.84
Kyte-Doolittle Hydrophobicity Value 0.060
Molecular Weight (kDa) 4699.5
Isoelectric Point (pI) 5.61

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 14 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004897 (786 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_0090

Human Homologs

References

No references are associated with this feature.