Pseudomonas putida S16, PPS_0130

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_0130
Name
Replicon chromosome
Genomic location 141133 - 141822 (- strand)

Cross-References

RefSeq YP_004699599.1
GI 339485071
Entrez 10935802
INSDC AEJ10719.1
NCBI Locus Tag PPS_0130
UniParc UPI0002172466
UniProtKB Acc F8FVL8
UniProtKB ID F8FVL8_PSEP6
UniRef100 UniRef100_F8FVL8
UniRef50 UniRef50_Q88RG7
UniRef90 UniRef90_Q88RG7

Product

Feature Type CDS
Coding Frame 1
Product Name
GntR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 2.69
Kyte-Doolittle Hydrophobicity Value -0.247
Molecular Weight (kDa) 25761.4
Isoelectric Point (pI) 8.89

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 346 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001218 (1274 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_0130

Human Homologs

References

No references are associated with this feature.