Pseudomonas putida S16, PPS_0404

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_0404
Name
Replicon chromosome
Genomic location 481656 - 482624 (- strand)

Cross-References

RefSeq YP_004699869.1
GI 339485341
Entrez 10936072
INSDC AEJ10989.1
NCBI Locus Tag PPS_0404
UniParc UPI000217276F
UniProtKB Acc F8FZS9
UniProtKB ID F8FZS9_PSEP6
UniRef100 UniRef100_F8FZS9
UniRef50 UniRef50_A0A089YBG4
UniRef90 UniRef90_A0A0A7PSZ3

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -8.09
Kyte-Doolittle Hydrophobicity Value -0.458
Molecular Weight (kDa) 34415.1
Isoelectric Point (pI) 4.85

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 12 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000582 (532 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_0404

Human Homologs

References

No references are associated with this feature.