Pseudomonas putida S16, PPS_0433

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_0433
Name
Replicon chromosome
Genomic location 517946 - 518905 (+ strand)

Cross-References

RefSeq YP_004699898.1
GI 339485370
Entrez 10940968
INSDC AEJ11018.1
NCBI Locus Tag PPS_0433
UniParc UPI000217278A
UniProtKB Acc F8G103
UniProtKB ID F8G103_PSEP6
UniRef100 UniRef100_A0A099MUP7
UniRef50 UniRef50_Q4K518
UniRef90 UniRef90_Q88QQ1

Product

Feature Type CDS
Coding Frame 1
Product Name
biotin-protein ligase
Synonyms
Evidence for Translation
Charge (pH 7) -0.62
Kyte-Doolittle Hydrophobicity Value -0.084
Molecular Weight (kDa) 35.1
Isoelectric Point (pI) 6.87

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 618 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001431 (529 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_0433

Human Homologs

Ensembl 110, assembly GRCh38.p14
holocarboxylase synthetase [Source:HGNC Symbol;Acc:HGNC:4976]
E-value: 5.0e-05
Percent Identity: 25.8
Ensembl 110, assembly GRCh38.p14
holocarboxylase synthetase [Source:HGNC Symbol;Acc:HGNC:4976]
E-value: 5.0e-05
Percent Identity: 25.8
Ensembl 110, assembly GRCh38.p14
holocarboxylase synthetase [Source:HGNC Symbol;Acc:HGNC:4976]
E-value: 5.0e-05
Percent Identity: 25.8
Ensembl 110, assembly GRCh38.p14
holocarboxylase synthetase [Source:HGNC Symbol;Acc:HGNC:4976]
E-value: 5.0e-05
Percent Identity: 25.8
Ensembl 110, assembly GRCh38.p14
holocarboxylase synthetase [Source:HGNC Symbol;Acc:HGNC:4976]
E-value: 5.0e-05
Percent Identity: 25.8

References

No references are associated with this feature.