Pseudomonas putida S16, PPS_0539

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_0539
Name
Replicon chromosome
Genomic location 613359 - 614753 (- strand)

Cross-References

RefSeq YP_004700004.1
GI 339485476
Entrez 10936207
INSDC AEJ11124.1
NCBI Locus Tag PPS_0539
UniParc UPI0002172839
UniProtKB Acc F8G2D4
UniProtKB ID F8G2D4_PSEP6
UniRef100 UniRef100_A0A099MSW6
UniRef50 UniRef50_L7V2J3
UniRef90 UniRef90_Q4K5E2

Product

Feature Type CDS
Coding Frame 1
Product Name
ethanolamine ammonia lyase, large subunit
Synonyms
Evidence for Translation
Charge (pH 7) -15.05
Kyte-Doolittle Hydrophobicity Value 0.064
Molecular Weight (kDa) 50.0
Isoelectric Point (pI) 4.93

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 137 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001659 (529 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_0539

Human Homologs

References

No references are associated with this feature.