Pseudomonas putida S16, PPS_0543

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_0543
Name
Replicon chromosome
Genomic location 620341 - 621654 (+ strand)

Cross-References

RefSeq YP_004700008.1
GI 339485480
Entrez 10936211
INSDC AEJ11128.1
NCBI Locus Tag PPS_0543
UniParc UPI000217283D
UniProtKB Acc F8G2D8
UniProtKB ID F8G2D8_PSEP6
UniRef100 UniRef100_A0A0B5KJW5
UniRef50 UniRef50_P37773
UniRef90 UniRef90_Q1IFH8

Product

Feature Type CDS
Coding Frame 1
Product Name
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase
Synonyms
Evidence for Translation
Charge (pH 7) -8.96
Kyte-Doolittle Hydrophobicity Value -0.030
Molecular Weight (kDa) 46860.9
Isoelectric Point (pI) 6.05

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 579 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001663 (497 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_0543

Human Homologs

References

No references are associated with this feature.