Pseudomonas putida S16, PPS_0567

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_0567
Name
Replicon chromosome
Genomic location 648198 - 649535 (- strand)

Cross-References

RefSeq YP_004700032.1
GI 339485504
Entrez 10936235
INSDC AEJ11152.1
NCBI Locus Tag PPS_0567
UniParc UPI0002172308
UniProtKB Acc F8G2G2
UniProtKB ID F8G2G2_PSEP6
UniRef100 UniRef100_F8G2G2
UniRef50 UniRef50_Q48DJ8
UniRef90 UniRef90_I7CCE9

Product

Feature Type CDS
Coding Frame 1
Product Name
MATE efflux family protein
Synonyms
Evidence for Translation
Charge (pH 7) 10.81
Kyte-Doolittle Hydrophobicity Value 0.775
Molecular Weight (kDa) 47679.9
Isoelectric Point (pI) 10.28

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 329 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004453 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_0567

Human Homologs

References

No references are associated with this feature.