Pseudomonas putida S16, PPS_0606

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_0606
Name
Replicon chromosome
Genomic location 700380 - 701327 (+ strand)

Cross-References

RefSeq YP_004700071.1
GI 339485543
Entrez 10936274
INSDC AEJ11191.1
NCBI Locus Tag PPS_0606
UniParc UPI0002172374
UniProtKB Acc F8G3G9
UniProtKB ID F8G3G9_PSEP6
UniRef100 UniRef100_F8G3G9
UniRef50 UniRef50_Q0BYQ0
UniRef90 UniRef90_Q48NK3

Product

Feature Type CDS
Coding Frame 1
Product Name
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
Synonyms
Evidence for Translation
Charge (pH 7) -14.45
Kyte-Doolittle Hydrophobicity Value -0.230
Molecular Weight (kDa) 34.6
Isoelectric Point (pI) 4.67

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 513 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004216 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_0606

Human Homologs

References

No references are associated with this feature.