Pseudomonas putida S16, PPS_0819

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_0819
Name
Replicon chromosome
Genomic location 921380 - 922420 (- strand)

Cross-References

RefSeq YP_004700278.1
GI 339485750
Entrez 10936481
INSDC AEJ11398.1
NCBI Locus Tag PPS_0819
UniParc UPI00021737E7
UniProtKB Acc F8FUF0
UniProtKB ID F8FUF0_PSEP6
UniRef100 UniRef100_F8FUF0
UniRef50 UniRef50_Q4K6D3
UniRef90 UniRef90_Q1IEU1

Product

Feature Type CDS
Coding Frame 1
Product Name
glycerate dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -3.22
Kyte-Doolittle Hydrophobicity Value 0.012
Molecular Weight (kDa) 37126.2
Isoelectric Point (pI) 6.31

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 641 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000893 (1006 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_0819

Human Homologs

Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 9.8e-31
Percent Identity: 35.1
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 9.8e-31
Percent Identity: 35.1
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 9.8e-31
Percent Identity: 35.1
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 9.8e-31
Percent Identity: 35.1
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 9.8e-31
Percent Identity: 35.1
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 9.8e-31
Percent Identity: 35.1
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 9.8e-31
Percent Identity: 35.1

References

No references are associated with this feature.