Pseudomonas putida S16, PPS_0946

Gene Feature Overview

Strain	Pseudomonas putida S16 GCF_000219705.1|latest
Locus Tag	PPS_0946
Name
Replicon	chromosome
Genomic location	1058373 - 1059257 (- strand)

Cross-References

RefSeq	YP_004700405.1
GI	339485877
Entrez	10936608
INSDC	AEJ11525.1
NCBI Locus Tag	PPS_0946
UniParc	UPI0002173C23
UniProtKB Acc	F8FVX2
UniProtKB ID	F8FVX2_PSEP6
UniRef100	UniRef100_F8FVX2
UniRef50	UniRef50_G8Q989
UniRef90	UniRef90_G8Q989

Product

Feature Type	CDS
Coding Frame	1
Product Name	binding-protein-dependent transport system inner membrane protein
Synonyms
Evidence for Translation
Charge (pH 7)	0.14
Kyte-Doolittle Hydrophobicity Value	0.755
Molecular Weight (kDa)	31713.4
Isoelectric Point (pI)	7.19

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 583 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004091 (513 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PPS_0946 Search term: binding-protein-dependent transport system inner membrane protein

Human Homologs

References