Pseudomonas putida S16, PPS_0948

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_0948
Name
Replicon chromosome
Genomic location 1060411 - 1062006 (- strand)

Cross-References

RefSeq YP_004700407.1
GI 339485879
Entrez 10936610
INSDC AEJ11527.1
NCBI Locus Tag PPS_0948
UniParc UPI0002173C24
UniProtKB Acc F8FVX4
UniProtKB ID F8FVX4_PSEP6
UniRef100 UniRef100_A0A0B5KIR8
UniRef50 UniRef50_Q87WI5
UniRef90 UniRef90_F0E9G5

Product

Feature Type CDS
Coding Frame 1
Product Name
extracellular solute-binding protein
Synonyms
Evidence for Translation
Charge (pH 7) 0.82
Kyte-Doolittle Hydrophobicity Value -0.412
Molecular Weight (kDa) 59.5
Isoelectric Point (pI) 7.23

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 547 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004089 (498 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_0948

Human Homologs

References

No references are associated with this feature.