Pseudomonas putida S16, PPS_1009

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_1009
Name
Replicon chromosome
Genomic location 1122828 - 1123943 (+ strand)

Cross-References

RefSeq YP_004700468.1
GI 339485940
Entrez 10936671
INSDC AEJ11588.1
NCBI Locus Tag PPS_1009
UniParc UPI0002173E31
UniProtKB Acc F8FX82
UniProtKB ID F8FX82_PSEP6
UniRef100 UniRef100_A0A099MW94
UniRef50 UniRef50_Q4KHT5
UniRef90 UniRef90_I7C3X5

Product

Feature Type CDS
Coding Frame 1
Product Name
YjgP/YjgQ family permease
Synonyms
Evidence for Translation
Charge (pH 7) 6.72
Kyte-Doolittle Hydrophobicity Value 0.313
Molecular Weight (kDa) 41.4
Isoelectric Point (pI) 9.71

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 256 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001837 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_1009

Human Homologs

References

No references are associated with this feature.