Pseudomonas putida S16, PPS_1045

Gene Feature Overview

Strain	Pseudomonas putida S16 GCF_000219705.1|latest
Locus Tag	PPS_1045
Name
Replicon	chromosome
Genomic location	1163528 - 1164436 (+ strand)

Cross-References

RefSeq	YP_004700500.1
GI	339485972
Entrez	10936703
INSDC	AEJ11620.1
NCBI Locus Tag	PPS_1045
UniParc	UPI0002173F3C
UniProtKB Acc	F8FXB4
UniProtKB ID	F8FXB4_PSEP6
UniRef100	UniRef100_A0A059UQC5
UniRef50	UniRef50_H0PSQ0
UniRef90	UniRef90_A0A060IV76

Product

Feature Type	CDS
Coding Frame	1
Product Name	binding-protein-dependent transport system inner membrane protein
Synonyms
Evidence for Translation
Charge (pH 7)	10.43
Kyte-Doolittle Hydrophobicity Value	0.651
Molecular Weight (kDa)	33.8
Isoelectric Point (pI)	10.18

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 382 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002427 (526 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PPS_1045 Search term: binding-protein-dependent transport system inner membrane protein

Human Homologs

References