Pseudomonas putida S16, PPS_1093

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_1093
Name
Replicon chromosome
Genomic location 1225796 - 1226998 (+ strand)

Cross-References

RefSeq YP_004700548.1
GI 339486020
Entrez 10936751
INSDC AEJ11668.1
NCBI Locus Tag PPS_1093
UniParc UPI000217404D
UniProtKB Acc F8FYK5
UniProtKB ID F8FYK5_PSEP6
UniRef100 UniRef100_F8FYK5
UniRef50 UniRef50_Q88P05
UniRef90 UniRef90_Q88P05

Product

Feature Type CDS
Coding Frame 1
Product Name
general secretion pathway protein F
Synonyms
Evidence for Translation
Charge (pH 7) 15.28
Kyte-Doolittle Hydrophobicity Value 0.224
Molecular Weight (kDa) 43.6
Isoelectric Point (pI) 11.05

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 406 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000666 (814 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_1093

Human Homologs

References

No references are associated with this feature.