Pseudomonas putida S16, PPS_1172

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_1172
Name
Replicon chromosome
Genomic location 1309238 - 1309447 (+ strand)

Cross-References

RefSeq YP_004700627.1
GI 339486099
Entrez 10936830
INSDC AEJ11747.1
NCBI Locus Tag PPS_1172
UniParc UPI000000EF4A
UniProtKB Acc F8FZY2
UniProtKB ID F8FZY2_PSEP6
UniRef100 UniRef100_A0A099MWI0
UniRef50 UniRef50_Q4KHJ0
UniRef90 UniRef90_B1JBS5

Product

Feature Type CDS
Coding Frame 1
Product Name
cold shock protein CspA
Synonyms
Evidence for Translation
Charge (pH 7) 0.43
Kyte-Doolittle Hydrophobicity Value -0.543
Molecular Weight (kDa) 7.7
Isoelectric Point (pI) 7.52

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 496 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001118 (495 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_1172

Human Homologs

References

No references are associated with this feature.