Pseudomonas putida S16, PPS_1404

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_1404
Name
Replicon chromosome
Genomic location 1546300 - 1547040 (- strand)

Cross-References

RefSeq YP_004700859.1
GI 339486331
Entrez 10937062
INSDC AEJ11979.1
NCBI Locus Tag PPS_1404
UniParc UPI0002173806
UniProtKB Acc F8G3P0
UniProtKB ID F8G3P0_PSEP6
UniRef100 UniRef100_F8G3P0
UniRef50 UniRef50_Q2C3S0
UniRef90 UniRef90_I7CAI2

Product

Feature Type CDS
Coding Frame 1
Product Name
short-chain dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -6.29
Kyte-Doolittle Hydrophobicity Value -0.052
Molecular Weight (kDa) 26427.9
Isoelectric Point (pI) 4.73

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 645 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002442 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_1404

Human Homologs

Ensembl 110, assembly GRCh38.p14
hydroxysteroid 17-beta dehydrogenase 14 [Source:HGNC Symbol;Acc:HGNC:23238]
E-value: 1.2e-14
Percent Identity: 32.8

References

No references are associated with this feature.