Pseudomonas putida S16, PPS_1441

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_1441
Name
Replicon chromosome
Genomic location 1602631 - 1603662 (+ strand)

Cross-References

RefSeq YP_004700896.1
GI 339486368
Entrez 10937099
INSDC AEJ12016.1
NCBI Locus Tag PPS_1441
UniParc UPI00021739FD
UniProtKB Acc F8G3S7
UniProtKB ID F8G3S7_PSEP6
UniRef100 UniRef100_F8G3S7
UniRef50 UniRef50_Q48MZ7
UniRef90 UniRef90_Q48MZ7

Product

Feature Type CDS
Coding Frame 1
Product Name
GDP-mannose 4,6-dehydratase
Synonyms
Evidence for Translation
Charge (pH 7) -4.09
Kyte-Doolittle Hydrophobicity Value -0.180
Molecular Weight (kDa) 38649.9
Isoelectric Point (pI) 5.54

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 616 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004999 (381 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_1441

Human Homologs

Ensembl 110, assembly GRCh38.p14
GDP-mannose 4,6-dehydratase [Source:HGNC Symbol;Acc:HGNC:4369]
E-value: 3.9e-104
Percent Identity: 55.8

References

No references are associated with this feature.