Pseudomonas putida S16, PPS_1505

Gene Feature Overview

Strain	Pseudomonas putida S16 GCF_000219705.1|latest
Locus Tag	PPS_1505
Name
Replicon	chromosome
Genomic location	1668676 - 1670355 (+ strand)

Cross-References

RefSeq	YP_004700960.1
GI	339486432
Entrez	10937163
INSDC	AEJ12080.1
NCBI Locus Tag	PPS_1505
UniParc	UPI0002173B31
UniProtKB Acc	F8G4N2
UniProtKB ID	F8G4N2_PSEP6
UniRef100	UniRef100_A0A099MY99
UniRef50	UniRef50_Q4K8U0
UniRef90	UniRef90_B1J4W0

Product

Feature Type	CDS
Coding Frame	1
Product Name	DEAD/DEAH box helicase
Synonyms
Evidence for Translation
Charge (pH 7)	7.11
Kyte-Doolittle Hydrophobicity Value	-0.179
Molecular Weight (kDa)	60.9
Isoelectric Point (pI)	9.24

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 641 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002728 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PPS_1505 Search term: DEAD/DEAH box helicase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000310723 DEAD-box helicase 23 [Source:HGNC Symbol;Acc:HGNC:17347] E-value: 8.9e-58 Percent Identity: 40.4
Ensembl 110, assembly GRCh38.p14	ENSP00000515223 DEAD-box helicase 23 [Source:HGNC Symbol;Acc:HGNC:17347] E-value: 8.9e-58 Percent Identity: 40.4

References