Pseudomonas putida S16, PPS_1682

Gene Feature Overview

Strain	Pseudomonas putida S16 GCF_000219705.1|latest
Locus Tag	PPS_1682
Name
Replicon	chromosome
Genomic location	1884867 - 1886630 (+ strand)

Cross-References

RefSeq	YP_004701135.1
GI	339486607
Entrez	10937338
INSDC	AEJ12255.1
NCBI Locus Tag	PPS_1682
UniParc	UPI000217415E
UniProtKB Acc	F8FUM4
UniProtKB ID	F8FUM4_PSEP6
UniRef100	UniRef100_F8FUM4
UniRef50	UniRef50_Q48A62
UniRef90	UniRef90_I7C066

Product

Feature Type	CDS
Coding Frame	1
Product Name	lipid ABC transporter ATPase/inner membrane protein
Synonyms
Evidence for Translation
Charge (pH 7)	11.59
Kyte-Doolittle Hydrophobicity Value	0.373
Molecular Weight (kDa)	63254.9
Isoelectric Point (pI)	10.11

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001073 (497 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PPS_1682 Search term: lipid ABC transporter ATPase/inner membrane protein

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000351717 ATP binding cassette subfamily B member 8 [Source:HGNC Symbol;Acc:HGNC:49] E-value: 4.3e-87 Percent Identity: 37.9
Ensembl 110, assembly GRCh38.p14	ENSP00000297504 ATP binding cassette subfamily B member 8 [Source:HGNC Symbol;Acc:HGNC:49] E-value: 4.3e-87 Percent Identity: 37.9

References