Pseudomonas putida S16, PPS_1702

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_1702
Name
Replicon chromosome
Genomic location 1909449 - 1912058 (+ strand)

Cross-References

RefSeq YP_004701155.1
GI 339486627
Entrez 10937358
INSDC AEJ12275.1
NCBI Locus Tag PPS_1702
UniParc UPI0002174172
UniProtKB Acc F8FUP4
UniProtKB ID F8FUP4_PSEP6
UniRef100 UniRef100_A0A099MYW1
UniRef50 UniRef50_Q9HZJ5
UniRef90 UniRef90_Q4KFC2

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA topoisomerase I
Synonyms
Evidence for Translation
Charge (pH 7) 6.98
Kyte-Doolittle Hydrophobicity Value -0.588
Molecular Weight (kDa) 97.2
Isoelectric Point (pI) 8.03

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 665 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002571 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_1702

Human Homologs

References

No references are associated with this feature.