Pseudomonas putida S16, PPS_1990

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_1990
Name
Replicon chromosome
Genomic location 2226682 - 2227422 (- strand)

Cross-References

RefSeq YP_004701437.1
GI 339486909
Entrez 10937640
INSDC AEJ12557.1
NCBI Locus Tag PPS_1990
UniParc UPI000000F2AA
UniProtKB Acc F8FYW8
UniProtKB ID F8FYW8_PSEP6
UniRef100 UniRef100_A0A099MZ00
UniRef50 UniRef50_G2DHI0
UniRef90 UniRef90_B1J6F0

Product

Feature Type CDS
Coding Frame 1
Product Name
two component winged helix family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -1.85
Kyte-Doolittle Hydrophobicity Value -0.236
Molecular Weight (kDa) 27.9
Isoelectric Point (pI) 6.37

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 624 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005148 (385 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_1990

Human Homologs

References

No references are associated with this feature.