Pseudomonas putida S16, PPS_2007

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_2007
Name
Replicon chromosome
Genomic location 2245717 - 2246733 (- strand)

Cross-References

RefSeq YP_004701452.1
GI 339486924
Entrez 10937655
INSDC AEJ12572.1
NCBI Locus Tag PPS_2007
UniParc UPI0002173A1C
UniProtKB Acc F8G033
UniProtKB ID F8G033_PSEP6
UniRef100 UniRef100_F8G033
UniRef50 UniRef50_I7BH25
UniRef90 UniRef90_I7BH25

Product

Feature Type CDS
Coding Frame 1
Product Name
transport system permease
Synonyms
Evidence for Translation
Charge (pH 7) 9.79
Kyte-Doolittle Hydrophobicity Value 1.121
Molecular Weight (kDa) 34.4
Isoelectric Point (pI) 10.91

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 552 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002661 (994 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_2007

Human Homologs

References

No references are associated with this feature.