Pseudomonas putida S16, PPS_2057

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_2057
Name
Replicon chromosome
Genomic location 2299410 - 2301101 (- strand)

Cross-References

RefSeq YP_004701500.1
GI 339486972
Entrez 10937703
INSDC AEJ12620.1
NCBI Locus Tag PPS_2057
UniParc UPI0002173B42
UniProtKB Acc F8G081
UniProtKB ID F8G081_PSEP6
UniRef100 UniRef100_F8G081
UniRef50 UniRef50_Q4ZX89
UniRef90 UniRef90_F8G081

Product

Feature Type CDS
Coding Frame 1
Product Name
OPT family oligopeptide transporter
Synonyms
Evidence for Translation
Charge (pH 7) 8.73
Kyte-Doolittle Hydrophobicity Value 0.806
Molecular Weight (kDa) 59407.1
Isoelectric Point (pI) 9.32

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 110 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG017166 (93 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_2057

Human Homologs

References

No references are associated with this feature.