Pseudomonas putida S16, PPS_2427

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_2427
Name
Replicon chromosome
Genomic location 2735208 - 2736122 (- strand)

Cross-References

RefSeq YP_004701868.1
GI 339487340
Entrez 10938071
INSDC AEJ12988.1
NCBI Locus Tag PPS_2427
UniParc UPI00021734FB
UniProtKB Acc F8G5H2
UniProtKB ID F8G5H2_PSEP6
UniRef100 UniRef100_A0A099N113
UniRef50 UniRef50_Q9I0Z0
UniRef90 UniRef90_Q48JB6

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -1.82
Kyte-Doolittle Hydrophobicity Value 0.059
Molecular Weight (kDa) 33.3
Isoelectric Point (pI) 6.38

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 284 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001179 (1943 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_2427

Human Homologs

References

No references are associated with this feature.