Strain |
Pseudomonas putida S16
GCF_000219705.1|latest |
Locus Tag |
PPS_2715
|
Name |
|
Replicon | chromosome |
Genomic location | 3008874 - 3011366 (+ strand) |
RefSeq | YP_004702146.1 |
GI | 339487618 |
Entrez | 10938349 |
INSDC | AEJ13266.1 |
NCBI Locus Tag | PPS_2715 |
UniParc | UPI0002173C7C |
UniProtKB Acc | F8FV15 |
UniProtKB ID | F8FV15_PSEP6 |
UniRef100 | UniRef100_F8FV15 |
UniRef50 | UniRef50_Q9I1X7 |
UniRef90 | UniRef90_L0FHZ0 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
ATP-dependent DNA ligase
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | 15.94 |
Kyte-Doolittle Hydrophobicity Value | -0.478 |
Molecular Weight (kDa) | 92568.6 |
Isoelectric Point (pI) | 9.39 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 292 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG003336 (490 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PPS_2715
Search term: ATP-dependent DNA ligase
|
Ensembl
110, assembly
GRCh38.p14
|
DNA ligase 1 [Source:HGNC Symbol;Acc:HGNC:6598]
E-value:
5.8e-21
Percent Identity:
28.8
|
Ensembl
110, assembly
GRCh38.p14
|
DNA ligase 1 [Source:HGNC Symbol;Acc:HGNC:6598]
E-value:
5.8e-21
Percent Identity:
28.8
|
Ensembl
110, assembly
GRCh38.p14
|
DNA ligase 1 [Source:HGNC Symbol;Acc:HGNC:6598]
E-value:
5.8e-21
Percent Identity:
28.8
|
Ensembl
110, assembly
GRCh38.p14
|
DNA ligase 1 [Source:HGNC Symbol;Acc:HGNC:6598]
E-value:
5.8e-21
Percent Identity:
28.8
|
Ensembl
110, assembly
GRCh38.p14
|
DNA ligase 1 [Source:HGNC Symbol;Acc:HGNC:6598]
E-value:
5.8e-21
Percent Identity:
28.8
|
Ensembl
110, assembly
GRCh38.p14
|
DNA ligase 1 [Source:HGNC Symbol;Acc:HGNC:6598]
E-value:
5.8e-21
Percent Identity:
28.8
|
Ensembl
110, assembly
GRCh38.p14
|
DNA ligase 1 [Source:HGNC Symbol;Acc:HGNC:6598]
E-value:
5.8e-21
Percent Identity:
28.8
|
Ensembl
110, assembly
GRCh38.p14
|
DNA ligase 1 [Source:HGNC Symbol;Acc:HGNC:6598]
E-value:
5.8e-21
Percent Identity:
28.8
|