Pseudomonas putida S16, PPS_2784

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_2784
Name
Replicon chromosome
Genomic location 3090177 - 3091118 (+ strand)

Cross-References

RefSeq YP_004702215.1
GI 339487687
Entrez 10938418
INSDC AEJ13335.1
NCBI Locus Tag PPS_2784
UniParc UPI0002173E98
UniProtKB Acc F8FWD3
UniProtKB ID F8FWD3_PSEP6
UniRef100 UniRef100_A0A099N248
UniRef50 UniRef50_Q48G68
UniRef90 UniRef90_Q88I58

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -0.20
Kyte-Doolittle Hydrophobicity Value -0.223
Molecular Weight (kDa) 35.2
Isoelectric Point (pI) 6.96

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 488 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG016108 (164 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_2784

Human Homologs

References

No references are associated with this feature.