Pseudomonas putida S16, PPS_2807

Gene Feature Overview

Strain	Pseudomonas putida S16 GCF_000219705.1|latest
Locus Tag	PPS_2807
Name
Replicon	chromosome
Genomic location	3115839 - 3116495 (- strand)

Cross-References

RefSeq	YP_004702238.1
GI	339487710
Entrez	10938441
INSDC	AEJ13358.1
NCBI Locus Tag	PPS_2807
UniParc	UPI0002173F9C
UniProtKB Acc	F8FWF6
UniProtKB ID	F8FWF6_PSEP6
UniRef100	UniRef100_A0A099MZQ2
UniRef50	UniRef50_P42316
UniRef90	UniRef90_Q1IAP6

Product

Feature Type	CDS
Coding Frame	1
Product Name	3-oxoacid CoA-transferase subunit B
Synonyms
Evidence for Translation
Charge (pH 7)	-10.58
Kyte-Doolittle Hydrophobicity Value	0.157
Molecular Weight (kDa)	23.2
Isoelectric Point (pI)	4.36

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 280 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003435 (528 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PPS_2807 Search term: 3-oxoacid CoA-transferase subunit B

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000196371 3-oxoacid CoA-transferase 1 [Source:HGNC Symbol;Acc:HGNC:8527] E-value: 4.0e-54 Percent Identity: 49.8
Ensembl 110, assembly GRCh38.p14	ENSP00000425348 3-oxoacid CoA-transferase 1 [Source:HGNC Symbol;Acc:HGNC:8527] E-value: 4.0e-54 Percent Identity: 49.8

References