Pseudomonas putida S16, PPS_2820

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_2820
Name
Replicon chromosome
Genomic location 3131376 - 3132149 (- strand)

Cross-References

RefSeq YP_004702251.1
GI 339487723
Entrez 10938454
INSDC AEJ13371.1
NCBI Locus Tag PPS_2820
UniParc UPI0002173FA9
UniProtKB Acc F8FXK7
UniProtKB ID F8FXK7_PSEP6
UniRef100 UniRef100_F8FXK7
UniRef50 UniRef50_Q4KH07
UniRef90 UniRef90_B0KTG0

Product

Feature Type CDS
Coding Frame 1
Product Name
IclR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 0.77
Kyte-Doolittle Hydrophobicity Value -0.102
Molecular Weight (kDa) 28.8
Isoelectric Point (pI) 7.15

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 144 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003936 (371 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_2820

Human Homologs

References

No references are associated with this feature.