Pseudomonas putida S16, PPS_2979

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_2979
Name
Replicon chromosome
Genomic location 3339077 - 3339388 (+ strand)

Cross-References

RefSeq YP_004702408.1
GI 339487880
Entrez 10938611
INSDC AEJ13528.1
NCBI Locus Tag PPS_2979
UniParc UPI00021732DD
UniProtKB Acc F8G0A5
UniProtKB ID F8G0A5_PSEP6
UniRef100 UniRef100_F8G0A5
UniRef50 UniRef50_Q88H67
UniRef90 UniRef90_B0KQR8

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -1.36
Kyte-Doolittle Hydrophobicity Value -0.231
Molecular Weight (kDa) 11113.5
Isoelectric Point (pI) 6.23

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 2 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001186 (345 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_2979

Human Homologs

References

No references are associated with this feature.