Pseudomonas putida S16, PPS_2988

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_2988
Name
Replicon chromosome
Genomic location 3349299 - 3350162 (- strand)

Cross-References

RefSeq YP_004702417.1
GI 339487889
Entrez 10938620
INSDC AEJ13537.1
NCBI Locus Tag PPS_2988
UniParc UPI00021732E5
UniProtKB Acc F8G0B4
UniProtKB ID F8G0B4_PSEP6
UniRef100 UniRef100_F8G0B4
UniRef50 UniRef50_A0A010PGD8
UniRef90 UniRef90_F8G0B4

Product

Feature Type CDS
Coding Frame 1
Product Name
ThiJ/PfpI domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) -0.60
Kyte-Doolittle Hydrophobicity Value -0.113
Molecular Weight (kDa) 30.7
Isoelectric Point (pI) 6.80

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 263 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG022978 (42 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_2988

Human Homologs

References

No references are associated with this feature.