Pseudomonas putida S16, PPS_3032

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_3032
Name
Replicon chromosome
Genomic location 3400876 - 3401775 (+ strand)

Cross-References

RefSeq YP_004702461.1
GI 339487933
Entrez 10938664
INSDC AEJ13581.1
NCBI Locus Tag PPS_3032
UniParc UPI0002173514
UniProtKB Acc F8G0F8
UniProtKB ID F8G0F8_PSEP6
UniRef100 UniRef100_A0A099N2S2
UniRef50 UniRef50_Q9I2A0
UniRef90 UniRef90_A5W2L3

Product

Feature Type CDS
Coding Frame 1
Product Name
hydroxymethylglutaryl-CoA lyase
Synonyms
Evidence for Translation
Charge (pH 7) -3.71
Kyte-Doolittle Hydrophobicity Value 0.055
Molecular Weight (kDa) 31.5
Isoelectric Point (pI) 5.97

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 365 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003428 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_3032

Human Homologs

Ensembl 110, assembly GRCh38.p14
3-hydroxy-3-methylglutaryl-CoA lyase [Source:HGNC Symbol;Acc:HGNC:5005]
E-value: 8.0e-98
Percent Identity: 58.5

References

No references are associated with this feature.