Pseudomonas putida S16, PPS_3044

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_3044
Name
Replicon chromosome
Genomic location 3415775 - 3416968 (- strand)

Cross-References

RefSeq YP_004702473.1
GI 339487945
Entrez 10938676
INSDC AEJ13593.1
NCBI Locus Tag PPS_3044
UniParc UPI0002173520
UniProtKB Acc F8G0H0
UniProtKB ID F8G0H0_PSEP6
UniRef100 UniRef100_F8G0H0
UniRef50 UniRef50_Q4K9R6
UniRef90 UniRef90_Q88H16

Product

Feature Type CDS
Coding Frame 1
Product Name
secretion protein HlyD family protein
Synonyms
Evidence for Translation
Charge (pH 7) -3.83
Kyte-Doolittle Hydrophobicity Value -0.162
Molecular Weight (kDa) 42.8
Isoelectric Point (pI) 6.25

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 373 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004751 (498 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_3044

Human Homologs

References

No references are associated with this feature.